C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087956 Med12-003 ENSMUSG00000079487 10090 + X:101274260-101297465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087956
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087956 3.535±1.11 6.197±1.51 3.772±0.83 7.174±2.02 1.405±0.13 2.107±1.03 1.472±0.48 3.477±1.07 1.138±0.29 8.825±3.42 2.613±0.42 1.032±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057U CIL_00057U_0002 CGP X:101264378-101297465
CIL_00057X CIL_00057X_0002 CGP X:101274030-101325963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001190 IGI RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription
GO:0001843 IMP neural tube closure
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0007507 IMP heart development
GO:0008013 IEA beta-catenin binding
GO:0008134 IPI transcription factor binding
GO:0014003 IMP oligodendrocyte development
GO:0014044 IMP Schwann cell development
GO:0016592 IDA mediator complex
GO:0019827 IMP stem cell maintenance
GO:0060070 IMP canonical Wnt signaling pathway
GO:0060071 IMP Wnt signaling pathway, planar cell polarity pathway
GO:0090245 IMP axis elongation involved in somitogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333646 MED12-201 protein_coding Homo_sapiens 0 7817
ENST00000374080 MED12-002 protein_coding Homo_sapiens 0 7860
ENST00000374102 MED12-001 protein_coding Homo_sapiens 0 7840
ENST00000429213 MED12-005 protein_coding Homo_sapiens 0 473
ENST00000444034 MED12-010 protein_coding Homo_sapiens 0 891
ENST00000460771 MED12-009 processed_transcript Homo_sapiens 0 468
ENST00000462984 MED12-007 processed_transcript Homo_sapiens 0 592
ENST00000471663 MED12-006 processed_transcript Homo_sapiens 0 516
ENST00000489199 MED12-008 processed_transcript Homo_sapiens 0 313

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