C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sphingosine-1-phosphate receptor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087978 S1pr3-201 ENSMUSG00000067586 10090 + 13:51408618-51422797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087978
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087978 5.923±1.93 4.644±0.48 1.862±0.26 2.587±1.75 6.857±0.92 3.163±0.30 7.257±0.19 6.453±1.79 0.755±0.24 21.592±6.49 1.481±0.35 4.585±1.50 1.481±0.72 1.180±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000077 CIL_000077_0003 CGP 13:51408618-51567084

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001816 IMP cytokine production
GO:0003376 IEA sphingosine-1-phosphate signaling pathway
GO:0004930 TAS G-protein coupled receptor activity
GO:0005178 IEA integrin binding
GO:0005886 IEA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006954 IMP inflammatory response
GO:0007193 IDA adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
GO:0032651 IMP regulation of interleukin-1 beta production
GO:0038036 IEA sphingosine-1-phosphate receptor activity
GO:1903141 IEA negative regulation of establishment of endothelial barrier

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358157 S1PR3-002 protein_coding Homo_sapiens 0 1203
ENST00000375846 S1PR3-001 protein_coding Homo_sapiens 0 1203

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