C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4931409K22 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088302 4931409K22Rik-201 ENSMUSG00000038199 10090 - 5:24543434-24555469 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000088302
Transcript ID Adipose Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000088302 0.042±0.03 0.040±0.02 0.041±0.00 0.039±0.03 0.026±0.01 0.011±0.00 0.075±0.03 0.233±0.26 40.919±30.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843
CIL_00005V CIL_00005V_0002 CGP 5:24532697-24555469
CIL_0004EM CIL_0004EM_0002 CGP 5:24543434-24577467

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000615129 IQCA1P1-001 protein_coding Homo_sapiens 0 1683

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