C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004EM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000278685-ENSG00000033050 CGP 9606 7:151190873-151227230
GeneTranscriptPositionBiotype
ENSG00000033050 (ABCF2)
ATP-binding cassette, sub-family F (GCN20), member 2 		ENST00000222388 (ABCF2-003) 151207837-151227166 protein_coding
ENST00000287844 (ABCF2-001) 151212490-151227230 protein_coding
ENST00000441774 (ABCF2-004) 151223680-151227035 protein_coding
ENST00000468073 (ABCF2-006) 151221636-151226626 protein_coding
ENST00000473874 (ABCF2-007) 151218160-151221984 processed_transcript
ENST00000477252 (ABCF2-005) 151226473-151226958 processed_transcript
ENSG00000278685 (IQCA1P1)
IQ motif containing with AAA domain 1 pseudogene 1 		ENST00000611102 (IQCA1P1-004) 151191827-151194279 nonsense_mediated_decay
ENST00000613681 (IQCA1P1-003) 151194256-151197302 nonsense_mediated_decay
ENST00000615129 (IQCA1P1-001) 151190873-151205496 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0004EM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038199-ENSMUSG00000028953 CGP 10090 5:24543434-24577467
GeneTranscriptPositionBiotype
ENSMUSG00000028953 (Abcf2)
ATP-binding cassette, sub-family F (GCN20), member 2 		ENSMUST00000030795 (Abcf2-201) 24565341-24577467 protein_coding
ENSMUSG00000038199 (4931409K22Rik)
RIKEN cDNA 4931409K22 gene 		ENSMUST00000088302 (4931409K22Rik-201) 24543434-24555469 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EM_0001ENSG00000033050ENST00000222388ENST00000287844ENST00000441774ENST00000468073ENST00000473874ENST00000477252ENSG00000278685ENST00000611102ENST00000613681ENST00000615129CIL_0004EM_0002ENSMUSG00000028953ENSMUST00000030795ENSMUSG00000038199ENSMUST00000088302
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EM_0001ENSG00000033050ENST00000222388ENST00000287844ENST00000468073ENST00000473874ENSG00000278685ENST00000611102ENST00000613681ENST00000615129CIL_0004EM_0002ENSMUSG00000028953ENSMUST00000030795ENSMUSG00000038199ENSMUST00000088302
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000033050 ENST00000222388 N/A 6.427±0.00 0.576±0.00 2.509±0.00 4.020±0.00 2.810±0.00 1.906±0.31 1.221±0.00 2.822±0.00 2.143±0.39 13.638±5.83 4.933±0.57 6.683±3.80 9.006±4.90
ENST00000287844 6.422±0.00 5.555±0.00 0.821±0.00 8.380±3.68 3.415±2.63 3.201±2.07 5.174±3.38 6.435±6.08 1.921±0.29 3.932±0.00 10.893±9.89 7.618±3.48 8.194±2.26 8.639±1.77
ENST00000441774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468073 N/A N/A 1.658±0.00 N/A N/A N/A N/A N/A N/A 2.096±0.00 N/A N/A N/A N/A
ENST00000473874 N/A N/A N/A N/A N/A N/A N/A 1.319±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278685 ENST00000611102 0.036±0.00 N/A N/A 0.115±0.00 N/A N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000613681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.714±0.00
ENST00000615129 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.006±0.00 0.461±0.28
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028953 ENSMUST00000030795 21.452±0.85 36.466±11.13 13.823±4.98 29.471±8.31 26.019±6.30 18.079±5.78 16.143±1.87 16.789±3.58 19.174±7.78 24.179±4.88 42.961±5.61 34.481±14.10 26.227±16.98 70.190±9.31
ENSMUSG00000038199 ENSMUST00000088302 0.042±0.03 N/A N/A 0.040±0.02 0.041±0.00 N/A 0.039±0.03 0.026±0.01 0.011±0.00 N/A N/A 0.075±0.03 0.233±0.26 40.919±30.87

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