C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 15 (oligopeptide transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088386 Slc15a1-201 ENSMUSG00000025557 10090 - 14:121459621-121505254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088386 0.230±0.18 0.083±0.05 0.023±0.00 0.014±0.01 0.116±0.10 28.249±6.76 0.014±0.00 0.142±0.08 0.018±0.01 0.983±0.53 0.048±0.00 3.083±0.95 0.318±0.20 0.321±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G0 CIL_0004G0_0003 CGP 14:121286343-121505254
CIL_0004FT CIL_0004FT_0003 CGP 14:121459621-121797734

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005427 IDA proton-dependent oligopeptide secondary active transmembrane transporter activity
GO:0006857 IDA oligopeptide transport
GO:0015031 IEA protein transport
GO:0015293 IEA symporter activity
GO:0016021 IDA integral component of membrane
GO:0035672 IDA oligopeptide transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376494 SLC15A1-002 retained_intron Homo_sapiens 0 549
ENST00000376503 SLC15A1-001 protein_coding Homo_sapiens 0 2023
ENST00000613008 SLC15A1-201 protein_coding Homo_sapiens 0 549
ENST00000618992 SLC15A1-202 protein_coding Homo_sapiens 0 1997

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