C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 13, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089860 Fam13a-001 ENSMUSG00000037709 10090 - 6:58932090-59024549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089860 11.904±2.10 9.281±1.73 0.438±0.13 1.276±0.27 14.576±1.05 4.927±0.58 2.444±0.40 12.704±0.62 1.395±1.05 5.315±1.04 1.305±0.44 14.230±3.84 0.222±0.15 0.142±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KJ CIL_0000KJ_0002 CGP 6:58905234-59024549
CIL_0000KM CIL_0000KM_0002 CGP 6:58932090-59212033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264344 FAM13A-022 protein_coding Homo_sapiens 0 1903
ENST00000395002 FAM13A-001 protein_coding Homo_sapiens 0 1332
ENST00000503556 FAM13A-006 protein_coding Homo_sapiens 0 1847
ENST00000504836 FAM13A-002 nonsense_mediated_decay Homo_sapiens 0 1000
ENST00000507352 FAM13A-007 nonsense_mediated_decay Homo_sapiens 0 619
ENST00000508360 FAM13A-017 retained_intron Homo_sapiens 0 915
ENST00000508369 FAM13A-024 protein_coding Homo_sapiens 0 1953
ENST00000509478 FAM13A-009 retained_intron Homo_sapiens 9e-27 126
ENST00000511573 FAM13A-003 retained_intron Homo_sapiens 0 1000
ENST00000511623 FAM13A-019 retained_intron Homo_sapiens 4.00001e-41 171
ENST00000511976 FAM13A-023 protein_coding Homo_sapiens 0 1672
ENST00000513837 FAM13A-005 protein_coding Homo_sapiens 0 1794

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