C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 87A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090042 Tmem87a-002 ENSMUSG00000033808 10090 - 2:120355312-120404069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090042
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090042 6.992±0.89 6.537±0.71 9.204±0.41 8.407±1.29 11.170±3.48 4.298±0.55 5.755±0.00 6.953±0.71 5.629±1.57 8.274±0.80 12.866±0.00 8.171±2.12 5.002±0.50 2.420±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PM CIL_0005PM_0002 CGP 2:120316461-120404113
CIL_0005PL CIL_0005PL_0002 CGP 2:120355312-120461700

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307216 TMEM87A-002 protein_coding Homo_sapiens 0 534
ENST00000389834 TMEM87A-001 protein_coding Homo_sapiens 0 2542
ENST00000448392 TMEM87A-201 protein_coding Homo_sapiens 0 2362
ENST00000561578 TMEM87A-009 protein_coding Homo_sapiens 0 586
ENST00000562946 TMEM87A-004 retained_intron Homo_sapiens 0 1631
ENST00000563371 TMEM87A-008 protein_coding Homo_sapiens 0 455
ENST00000564329 TMEM87A-011 retained_intron Homo_sapiens 0 351
ENST00000566014 TMEM87A-010 protein_coding Homo_sapiens 0 612
ENST00000566474 TMEM87A-007 protein_coding Homo_sapiens 0 472
ENST00000568067 TMEM87A-012 retained_intron Homo_sapiens 0 359
ENST00000568400 TMEM87A-006 protein_coding Homo_sapiens 0 998
ENST00000568432 TMEM87A-005 protein_coding Homo_sapiens 0 418
ENST00000569075 TMEM87A-003 nonsense_mediated_decay Homo_sapiens 0 1109

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