C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 87A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389834 TMEM87A-001 ENSG00000103978 9606 - 15:42210532-42273663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000389834
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000389834 4.790±0.00 9.602±0.00 10.034±4.09 13.423±4.41 9.342±5.39 5.923±4.56 7.583±0.00 4.927±0.06 10.739±2.02 11.331±2.76 8.292±1.77 24.203±13.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PM CIL_0005PM_0001 CGP 15:42158701-42273663
CIL_0005PL CIL_0005PL_0001 CGP 15:42210452-42356935

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090042 Tmem87a-002 protein_coding Mus_musculus 0 2542
ENSMUST00000090046 Tmem87a-001 protein_coding Mus_musculus 0 2357
ENSMUST00000124806 Tmem87a-005 processed_transcript Mus_musculus 0 2194
ENSMUST00000110729 Tmem87a-003 protein_coding Mus_musculus 0 1664
ENSMUST00000136410 Tmem87a-004 processed_transcript Mus_musculus 0 1578
ENSMUST00000143182 Tmem87a-006 retained_intron Mus_musculus 0 695
ENSMUST00000151740 Tmem87a-007 processed_transcript Mus_musculus 0 665

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