C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 87A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090046 Tmem87a-001 ENSMUSG00000033808 10090 - 2:120355312-120404089 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastLiverLungPlacentaENSMUST00000090046
Transcript ID Adipose Bladder Breast Liver Lung Placenta
ENSMUST00000090046 5.295±0.00 5.974±0.33 8.542±0.00 3.382±0.00 4.837±0.00 6.965±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PM CIL_0005PM_0002 CGP 2:120316461-120404113
CIL_0005PL CIL_0005PL_0002 CGP 2:120355312-120461700

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307216 TMEM87A-002 protein_coding Homo_sapiens 0 545
ENST00000389834 TMEM87A-001 protein_coding Homo_sapiens 0 2357
ENST00000448392 TMEM87A-201 protein_coding Homo_sapiens 0 2167
ENST00000561578 TMEM87A-009 protein_coding Homo_sapiens 0 586
ENST00000562946 TMEM87A-004 retained_intron Homo_sapiens 0 1445
ENST00000563371 TMEM87A-008 protein_coding Homo_sapiens 0 455
ENST00000564329 TMEM87A-011 retained_intron Homo_sapiens 0 351
ENST00000566014 TMEM87A-010 protein_coding Homo_sapiens 0 771
ENST00000566474 TMEM87A-007 protein_coding Homo_sapiens 0 472
ENST00000568067 TMEM87A-012 retained_intron Homo_sapiens 0 359
ENST00000568400 TMEM87A-006 protein_coding Homo_sapiens 0 998
ENST00000568432 TMEM87A-005 protein_coding Homo_sapiens 0 418
ENST00000569075 TMEM87A-003 nonsense_mediated_decay Homo_sapiens 0 1107

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