C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELKS/RAB6-interacting/CAST family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090302 Erc2-201 ENSMUSG00000040640 10090 + 14:27622442-28478537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090302 0.107±0.07 0.308±0.15 0.150±0.08 10.414±3.99 0.022±0.01 0.080±0.05 0.057±0.00 0.731±0.37 0.366±0.35 0.295±0.00 0.015±0.00 0.159±0.07 0.168±0.14 0.323±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UE CIL_0007UE_0002 VISTA 14:27067008-27667960
CIL_00002X CIL_00002X_0002 CGP 14:27622442-28527447

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0030054 IEA cell junction
GO:0030426 ISS growth cone
GO:0042734 ISS presynaptic membrane
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288221 ERC2-001 protein_coding Homo_sapiens 0 3884
ENST00000460849 ERC2-005 nonsense_mediated_decay Homo_sapiens 0 3884
ENST00000469720 ERC2-002 processed_transcript Homo_sapiens 0 281
ENST00000472917 ERC2-016 processed_transcript Homo_sapiens 0 652
ENST00000473469 ERC2-008 processed_transcript Homo_sapiens 0 281
ENST00000477381 ERC2-007 processed_transcript Homo_sapiens 0 538
ENST00000484530 ERC2-004 processed_transcript Homo_sapiens 0 1099
ENST00000484857 ERC2-015 retained_intron Homo_sapiens 0 316
ENST00000486496 ERC2-003 processed_transcript Homo_sapiens 0 1821
ENST00000492584 ERC2-006 protein_coding Homo_sapiens 0 1306
ENST00000612797 ERC2-201 protein_coding Homo_sapiens 0 3884

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