C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELKS/RAB6-interacting/CAST family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460849 ERC2-005 ENSG00000187672 9606 - 3:55510776-56468337 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverMuscleOvaryENST00000460849
Transcript ID Bladder Brain Breast Colon Heart Liver Muscle Ovary
ENST00000460849 0.069±0.00 11.309±0.00 0.016±0.00 0.012±0.00 0.018±0.00 0.125±0.00 0.009±0.00 0.133±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083K CIL_00083K_0001 VISTA 3:55190515-55792232
CIL_0007P0 CIL_0007P0_0001 UCNEbase 3:55244350-55755999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0030054 IEA cell junction
GO:0030426 ISS growth cone
GO:0042734 ISS presynaptic membrane
GO:0048786 TAS presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090302 Erc2-201 protein_coding Mus_musculus 0 3884

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