C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, metabotropic 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090512 Grm8-002 ENSMUSG00000024211 10090 - 6:27275612-28126195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000090512
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000090512 0.066±0.00 0.047±0.02 0.929±0.13 0.046±0.01 0.013±0.00 0.008±0.01 0.021±0.01 0.074±0.02 0.012±0.00 0.075±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OL CIL_0001OL_0002 CGP 6:25743737-28135178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001642 IDA group III metabotropic glutamate receptor activity
GO:0004930 ISS G-protein coupled receptor activity
GO:0005887 IBA integral component of plasma membrane
GO:0007196 IDA:ISS adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007608 IEA sensory perception of smell
GO:0008066 ISS glutamate receptor activity
GO:0035249 TAS synaptic transmission, glutamatergic
GO:0042734 IBA presynaptic membrane
GO:0051966 IBA regulation of synaptic transmission, glutamatergic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339582 GRM8-001 protein_coding Homo_sapiens 0 3936
ENST00000341617 GRM8-003 nonsense_mediated_decay Homo_sapiens 0 1938
ENST00000358373 GRM8-002 protein_coding Homo_sapiens 0 3838
ENST00000412160 GRM8-011 protein_coding Homo_sapiens 3.00004e-41 172
ENST00000444921 GRM8-201 protein_coding Homo_sapiens 0 1740
ENST00000448250 GRM8-009 processed_transcript Homo_sapiens 0 1158
ENST00000457830 GRM8-012 protein_coding Homo_sapiens 0 1336
ENST00000465844 GRM8-006 protein_coding Homo_sapiens 0 217
ENST00000472701 GRM8-014 nonsense_mediated_decay Homo_sapiens 0 3838
ENST00000473254 GRM8-005 processed_transcript Homo_sapiens 0 296
ENST00000480995 GRM8-004 processed_transcript Homo_sapiens 0 965
ENST00000489939 GRM8-007 processed_transcript Homo_sapiens 0 488
ENST00000495315 GRM8-008 processed_transcript Homo_sapiens 0 390
ENST00000515547 RP13-157F18.2-001 unprocessed_pseudogene Homo_sapiens 0 641

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