C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090569 Psma5-001 ENSMUSG00000068749 10090 + 3:108256926-108279974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090569
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090569 35.134±2.34 12.180±1.37 52.681±8.51 42.885±18.28 26.509±12.29 16.131±1.29 23.956±1.85 26.381±2.66 52.282±30.80 19.963±2.66 34.539±0.95 37.601±16.52 62.748±27.25 17.255±6.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005839 IDA proteasome core complex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000271308 PSMA5-001 protein_coding Homo_sapiens 0 1232
ENST00000477897 PSMA5-005 processed_transcript Homo_sapiens 0 272
ENST00000484563 PSMA5-003 processed_transcript Homo_sapiens 0 477
ENST00000490870 PSMA5-002 processed_transcript Homo_sapiens 0 1184
ENST00000538610 PSMA5-201 protein_coding Homo_sapiens 0 1079

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