C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type, 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484563 PSMA5-003 ENSG00000143106 9606 - 1:109411953-109426427 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000484563
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000484563 4.392±0.00 3.079±0.00 3.559±0.00 2.933±0.11 1.483±0.00 3.275±0.00 2.732±0.00 4.242±0.00 2.171±0.95 4.281±1.58 4.284±0.56 5.638±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098X CIL_00098X_0001 VISTA 1:108953074-109556228
CIL_00099A CIL_00099A_0001 VISTA 1:108974252-109576283
CIL_000734 CIL_000734_0002 CGP 1:109309568-109426427
CIL_000735 CIL_000735_0002 CGP 1:109399031-109482137

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090569 Psma5-001 protein_coding Mus_musculus 0 477
ENSMUST00000079684 Gm8394-201 protein_coding Mus_musculus 0 466
ENSMUST00000122331 Gm12989-001 processed_pseudogene Mus_musculus 0 375

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