C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type, 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490870 PSMA5-002 ENSG00000143106 9606 - 1:109401850-109426132 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000490870
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000490870 11.732±0.00 13.861±0.00 5.848±0.75 13.861±0.00 6.760±5.41 7.776±4.95 13.439±7.34 13.383±9.18 11.444±4.41 8.112±3.71 6.072±3.50 22.675±2.74 11.012±9.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098X CIL_00098X_0001 VISTA 1:108953074-109556228
CIL_00099A CIL_00099A_0001 VISTA 1:108974252-109576283
CIL_000734 CIL_000734_0002 CGP 1:109309568-109426427
CIL_000735 CIL_000735_0002 CGP 1:109399031-109482137

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090569 Psma5-001 protein_coding Mus_musculus 0 1184
ENSMUST00000079684 Gm8394-201 protein_coding Mus_musculus 0 1110
ENSMUST00000122331 Gm12989-001 processed_pseudogene Mus_musculus 0 1014
ENSMUST00000129708 Psma5-002 processed_transcript Mus_musculus 0 206

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