C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 21A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090586 Phf21a-203 ENSMUSG00000058318 10090 + 2:92221562-92364666 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090586 4.601±0.77 3.935±1.85 2.907±0.42 7.037±3.04 4.563±1.51 4.146±2.06 1.721±0.00 3.182±0.54 1.073±0.06 6.424±1.31 0.782±0.29 11.881±1.52 1.028±0.39 1.933±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IEA histone deacetylase complex
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001967 IMP suckling behavior
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323180 PHF21A-002 protein_coding Homo_sapiens 0 1864
ENST00000418153 PHF21A-004 protein_coding Homo_sapiens 0 3483
ENST00000524497 PHF21A-021 protein_coding Homo_sapiens 0 368
ENST00000525438 PHF21A-010 protein_coding Homo_sapiens 2e-32 143
ENST00000525676 PHF21A-016 protein_coding Homo_sapiens 0 355
ENST00000525679 PHF21A-014 processed_transcript Homo_sapiens 0 313
ENST00000527401 PHF21A-003 retained_intron Homo_sapiens 0 1725
ENST00000527753 PHF21A-015 processed_transcript Homo_sapiens 0 619
ENST00000527782 PHF21A-008 protein_coding Homo_sapiens 0.00000001 64
ENST00000529734 PHF21A-007 protein_coding Homo_sapiens 0 459
ENST00000529782 PHF21A-011 protein_coding Homo_sapiens 0 316
ENST00000530587 PHF21A-017 nonsense_mediated_decay Homo_sapiens 0 907
ENST00000531959 PHF21A-020 protein_coding Homo_sapiens 0 366
ENST00000532028 PHF21A-018 protein_coding Homo_sapiens 0 492
ENST00000532883 PHF21A-013 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000533757 PHF21A-009 protein_coding Homo_sapiens 0 278
ENST00000534766 PHF21A-022 retained_intron Homo_sapiens 0 414

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