C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 21A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418153 PHF21A-004 ENSG00000135365 9606 - 11:45933481-46121010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyMuscleOvaryPlacentaTestisENST00000418153
Transcript ID Adipose Brain Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000418153 3.418±0.00 2.552±0.00 3.949±0.00 1.870±1.32 1.249±0.36 1.840±0.00 3.472±1.61 2.250±0.97 15.773±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V0 CIL_0002V0_0002 CGP 11:45929323-46321422

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001967 IEA suckling behavior
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007596 TAS blood coagulation
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111293 Phf21a-001 protein_coding Mus_musculus 0 3546
ENSMUST00000090586 Phf21a-203 protein_coding Mus_musculus 0 3483
ENSMUST00000044036 Phf21a-201 protein_coding Mus_musculus 0 2619
ENSMUST00000111291 Phf21a-002 protein_coding Mus_musculus 0 2619
ENSMUST00000111294 Phf21a-004 protein_coding Mus_musculus 0 2087
ENSMUST00000159961 Phf21a-010 protein_coding Mus_musculus 0 2023
ENSMUST00000111290 Phf21a-204 protein_coding Mus_musculus 0 1879
ENSMUST00000111297 Phf21a-205 protein_coding Mus_musculus 0 1504
ENSMUST00000068702 Phf21a-202 protein_coding Mus_musculus 0 1365
ENSMUST00000111292 Phf21a-003 protein_coding Mus_musculus 0 1362
ENSMUST00000159727 Phf21a-009 protein_coding Mus_musculus 0 850
ENSMUST00000159366 Phf21a-014 protein_coding Mus_musculus 0 736
ENSMUST00000161044 Phf21a-016 retained_intron Mus_musculus 0 551
ENSMUST00000161067 Phf21a-015 protein_coding Mus_musculus 0 514
ENSMUST00000162146 Phf21a-013 protein_coding Mus_musculus 0 296
ENSMUST00000162188 Phf21a-012 protein_coding Mus_musculus 0 206
ENSMUST00000138995 Phf21a-007 protein_coding Mus_musculus 2.00386e-43 182
ENSMUST00000128781 Phf21a-006 protein_coding Mus_musculus 1e-36 159
ENSMUST00000142528 Phf21a-005 processed_transcript Mus_musculus 4e-31 141
ENSMUST00000162497 Phf21a-011 protein_coding Mus_musculus 5e-30 137
ENSMUST00000160235 Phf21a-008 retained_intron Mus_musculus 5e-30 137

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