C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inturned planar cell polarity effector homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091186 Intu-001 ENSMUSG00000060798 10090 + 3:40540767-40704774 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091186
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091186 0.652±0.48 0.746±0.37 0.705±0.13 2.818±1.53 0.590±0.36 1.186±0.23 3.828±0.57 1.835±0.28 0.692±0.14 1.801±0.25 0.481±0.13 1.706±0.59 0.724±0.37 0.864±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RF CIL_0008RF_0002 VISTA 3:40152073-40754343
CIL_0007AH CIL_0007AH_0002 CGP 3:40531286-40725593

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0007399 IMP nervous system development
GO:0008589 IMP regulation of smoothened signaling pathway
GO:0010839 IMP negative regulation of keratinocyte proliferation
GO:0021513 IMP spinal cord dorsal/ventral patterning
GO:0030216 IMP keratinocyte differentiation
GO:0031069 IMP hair follicle morphogenesis
GO:0042384 IMP cilium assembly
GO:0045880 IMP positive regulation of smoothened signaling pathway
GO:0051782 IMP negative regulation of cell division
GO:0060173 IMP limb development
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335251 INTU-003 protein_coding Homo_sapiens 0 2148
ENST00000503952 INTU-002 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000504276 INTU-006 retained_intron Homo_sapiens 1e-39 167

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