C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091299 Cdk7-201 ENSMUSG00000069089 10090 - 13:100697027-100730942 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091299 5.825±1.85 5.705±0.55 5.641±0.79 5.025±1.83 5.573±0.53 4.126±0.69 3.330±0.17 5.008±0.44 3.691±1.30 5.892±0.63 1.535±0.13 8.021±1.60 5.823±1.86 1.932±0.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IDA protein kinase activity
GO:0004693 ISS cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005675 ISS holo TFIIH complex
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006281 IEA DNA repair
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0006468 IEA protein phosphorylation
GO:0007049 IEA cell cycle
GO:0008022 IEA protein C-terminus binding
GO:0008094 ISS DNA-dependent ATPase activity
GO:0008353 ISS RNA polymerase II carboxy-terminal domain kinase activity
GO:0016301 IDA kinase activity
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0051301 IEA cell division
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256443 CDK7-001 protein_coding Homo_sapiens 0 1332
ENST00000434574 AC016732.2-001 processed_pseudogene Homo_sapiens 0 760
ENST00000502604 CDK7-003 protein_coding Homo_sapiens 0 1253
ENST00000504147 CDK7-009 nonsense_mediated_decay Homo_sapiens 0 664
ENST00000506563 CDK7-005 protein_coding Homo_sapiens 0 887
ENST00000506789 CDK7-010 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000508726 CDK7-013 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000510106 CDK7-011 nonsense_mediated_decay Homo_sapiens 0 824
ENST00000512687 CDK7-002 retained_intron Homo_sapiens 0 392
ENST00000513629 CDK7-012 processed_transcript Homo_sapiens 0 460
ENST00000514676 CDK7-004 protein_coding Homo_sapiens 0 793
ENST00000515180 CDK7-007 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000515391 CDK7-006 nonsense_mediated_decay Homo_sapiens 0 933
ENST00000613491 CDK7-002 retained_intron Homo_sapiens 0 392
ENST00000613505 CDK7-005 protein_coding Homo_sapiens 0 887
ENST00000614858 CDK7-003 protein_coding Homo_sapiens 0 1253
ENST00000614881 CDK7-007 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000614987 RPS6KA5-001 protein_coding Homo_sapiens 0.00004 58
ENST00000615305 CDK7-001 protein_coding Homo_sapiens 0 1332
ENST00000615854 CDK7-011 nonsense_mediated_decay Homo_sapiens 0 824
ENST00000617026 CDK7-004 protein_coding Homo_sapiens 0 793
ENST00000617289 CDK7-006 nonsense_mediated_decay Homo_sapiens 0 933
ENST00000617941 CDK7-010 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000618188 CDK7-012 processed_transcript Homo_sapiens 0 460
ENST00000618909 CDK7-013 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000622424 CDK7-009 nonsense_mediated_decay Homo_sapiens 0 664

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