C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000256443 CDK7-001 ENSG00000134058 9606 + 5:69234873-69277430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverOvaryPlacentaENST00000256443
Transcript ID Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000256443 2.495±0.00 1.759±0.00 1.200±0.00 0.242±0.00 1.903±0.00 0.788±0.26 3.531±1.50 9.353±3.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 TAS regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000718 TAS nucleotide-excision repair, DNA damage removal
GO:0003713 NAS transcription coactivator activity
GO:0004672 TAS:IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004693 IEA cyclin-dependent protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005675 IDA holo TFIIH complex
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006200 IDA ATP catabolic process
GO:0006281 TAS DNA repair
GO:0006283 TAS transcription-coupled nucleotide-excision repair
GO:0006289 TAS nucleotide-excision repair
GO:0006360 TAS transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006370 TAS 7-methylguanosine mRNA capping
GO:0006468 IEA protein phosphorylation
GO:0007050 TAS cell cycle arrest
GO:0008022 IPI protein C-terminus binding
GO:0008094 IDA DNA-dependent ATPase activity
GO:0008283 TAS cell proliferation
GO:0008353 IDA RNA polymerase II carboxy-terminal domain kinase activity
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016301 IEA kinase activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030521 NAS androgen receptor signaling pathway
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0050434 TAS positive regulation of viral transcription
GO:0050681 NAS androgen receptor binding
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091299 Cdk7-201 protein_coding Mus_musculus 0 1332
ENSDART00000051003 cdk7-001 protein_coding Danio_rerio 0 545
ENSDART00000073627 cdk7-002 protein_coding Danio_rerio 0 385

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