C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nascent polypeptide-associated complex alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092048 Naca-202 ENSMUSG00000061315 10090 + 10:128035346-128048637 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartLiverLungMuscleENSMUST00000092048
Transcript ID Adipose Adrenal Bladder Breast Heart Liver Lung Muscle
ENSMUST00000092048 1.907±0.04 0.913±0.00 4.161±1.76 2.805±1.70 24.076±3.34 0.595±0.00 1.546±0.56 40.671±20.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003713 IDA transcription coactivator activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006810 IEA transport
GO:0017025 IDA TBP-class protein binding
GO:0051451 IMP myoblast migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318548 NACAP2-001 processed_pseudogene Homo_sapiens 0 625
ENST00000356769 NACA-001 protein_coding Homo_sapiens 0 769
ENST00000359690 NACA3P-001 processed_pseudogene Homo_sapiens 0 640
ENST00000393891 NACA-003 protein_coding Homo_sapiens 0 765
ENST00000419462 NACAP1-001 processed_transcript Homo_sapiens 0 656
ENST00000454682 NACA-201 protein_coding Homo_sapiens 0 1051
ENST00000519039 NACAP1-002 transcribed_processed_pseudogene Homo_sapiens 0 628
ENST00000521764 NACA2-001 protein_coding Homo_sapiens 2e-24 117
ENST00000546392 NACA-005 protein_coding Homo_sapiens 0 730
ENST00000546410 NACA-017 retained_intron Homo_sapiens 0 327
ENST00000546862 NACA-012 protein_coding Homo_sapiens 0 477
ENST00000546917 NACA-006 protein_coding Homo_sapiens 4e-27 124
ENST00000547914 NACA-015 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000548084 NACA-013 nonsense_mediated_decay Homo_sapiens 3e-25 119
ENST00000548386 NACA-016 processed_transcript Homo_sapiens 0 387
ENST00000548563 NACA-011 protein_coding Homo_sapiens 0 756
ENST00000549259 NACA-007 protein_coding Homo_sapiens 0 640
ENST00000549855 NACA-020 protein_coding Homo_sapiens 0 375
ENST00000550920 NACA-018 protein_coding Homo_sapiens 0 771
ENST00000550952 NACA-004 protein_coding Homo_sapiens 0 1051
ENST00000551520 NACA-009 retained_intron Homo_sapiens 3e-36 156
ENST00000551775 NACA-010 processed_transcript Homo_sapiens 0 248
ENST00000551793 NACA-008 processed_transcript Homo_sapiens 6e-39 165
ENST00000552055 NACA-014 protein_coding Homo_sapiens 0 477
ENST00000552100 NACAP3-001 processed_pseudogene Homo_sapiens 0 531
ENST00000552540 NACA-002 protein_coding Homo_sapiens 0 765

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