C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methionine sulfoxide reductase B3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092143 Msrb3-001 ENSMUSG00000051236 10090 - 10:120781096-120899101 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092143 25.977±7.15 40.780±13.41 58.860±11.43 1.347±0.09 13.394±7.50 11.165±2.24 22.538±5.42 5.397±0.43 2.273±0.73 27.933±1.46 40.770±3.12 19.471±10.74 5.752±3.19 11.816±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088X CIL_00088X_0002 VISTA 10:120251958-120853597
CIL_0006Y5 CIL_0006Y5_0002 CGP 10:120781096-120979332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 ISA mitochondrion
GO:0005783 ISS endoplasmic reticulum
GO:0006979 IEA response to oxidative stress
GO:0008270 ISS zinc ion binding
GO:0030091 ISS protein repair
GO:0033743 ISS peptide-methionine (R)-S-oxide reductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308259 MSRB3-002 protein_coding Homo_sapiens 0 806
ENST00000355192 MSRB3-001 protein_coding Homo_sapiens 0 612
ENST00000446731 MSRB3-010 protein_coding Homo_sapiens 0 368
ENST00000535239 MSRB3-004 protein_coding Homo_sapiens 0 643
ENST00000535664 MSRB3-003 protein_coding Homo_sapiens 0 662
ENST00000538045 MSRB3-005 protein_coding Homo_sapiens 0 492
ENST00000540804 MSRB3-008 protein_coding Homo_sapiens 0 455
ENST00000541189 MSRB3-011 protein_coding Homo_sapiens 0 455
ENST00000541897 MSRB3-007 nonsense_mediated_decay Homo_sapiens 2e-36 156
ENST00000614640 MSRB3-201 protein_coding Homo_sapiens 0 702

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