C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: distal-less homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092768 Dlx3-001 ENSMUSG00000001510 10090 + 11:95120119-95125296 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092768
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092768 0.051±0.03 0.020±0.01 0.076±0.03 0.189±0.09 0.408±0.17 0.050±0.03 0.024±0.01 0.012±0.01 0.387±0.37 0.093±0.09 0.056±0.02 20.134±13.58 0.018±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811
CIL_0007QJ CIL_0007QJ_0002 VISTA 11:95039208-95641127
CIL_000877 CIL_000877_0002 VISTA 11:95055809-95658196
CIL_0009BV CIL_0009BV_0002 VISTA 11:95055825-95658170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001568 IMP blood vessel development
GO:0001890 IMP placenta development
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0042475 IMP odontogenesis of dentin-containing tooth
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0071895 IMP odontoblast differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017191 dlx3b-001 protein_coding Danio_rerio 0 246
ENST00000434704 DLX3-001 protein_coding Homo_sapiens 0 1522
ENST00000512495 DLX3-002 protein_coding Homo_sapiens 0 887

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