C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: distal-less homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434704 DLX3-001 ENSG00000064195 9606 - 17:49990005-49995224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000434704
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000434704 0.220±0.00 0.042±0.00 0.083±0.00 0.040±0.00 0.060±0.03 0.123±0.00 0.033±0.00 0.044±0.00 0.048±0.00 0.045±0.00 1.552±1.82 12.122±2.16 0.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000877 CIL_000877_0001 VISTA 17:49438854-50041456
CIL_0009BV CIL_0009BV_0001 VISTA 17:49438877-50041441
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219
CIL_0004N6 CIL_0004N6_0002 CGP 17:49968970-49995224
CIL_0004N5 CIL_0004N5_0002 CGP 17:49990005-50090481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001568 IEA blood vessel development
GO:0001890 IEA placenta development
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0042475 IEA odontogenesis of dentin-containing tooth
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0071895 IEA odontoblast differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092768 Dlx3-001 protein_coding Mus_musculus 0 1522
ENSDART00000017191 dlx3b-001 protein_coding Danio_rerio 0 268
ENSDART00000062026 dlx5a-201 protein_coding Danio_rerio 3e-22 111
ENSDART00000113388 dlx5a-001 protein_coding Danio_rerio 3e-22 111

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