Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	Rho GTPase activating protein 42
ENSMUST00000093893	Arhgap42-001	ENSMUSG00000050730	10090	-	9:8994329-9239101	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000093893	3.516±1.79	3.207±0.56	3.031±1.03	0.895±0.32	4.382±1.02	5.323±1.33	0.769±0.06	6.536±0.80	5.126±3.64	5.213±1.74	0.455±0.23	11.233±4.00	2.824±1.75	0.217±0.13

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0003CN	CIL_0003CN_0002	CGP	9:8994329-10904775

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003674	ND	molecular_function
GO:0005096	IEA	GTPase activator activity
GO:0005622	IEA	intracellular
GO:0007165	IEA	signal transduction
GO:0043547	IEA	positive regulation of GTPase activity

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000298815	ARHGAP42-201	protein_coding	Homo_sapiens	0	2760
ENST00000416089	ARHGAP42P2-001	unprocessed_pseudogene	Homo_sapiens	0	1101
ENST00000443989	ARHGAP42P3-001	processed_pseudogene	Homo_sapiens	0	857
ENST00000507474	ARHGAP42P1-001	unprocessed_pseudogene	Homo_sapiens	0	1051
ENST00000524649	ARHGAP42-009	retained_intron	Homo_sapiens	0	279
ENST00000524892	ARHGAP42-003	protein_coding	Homo_sapiens	0	3273
ENST00000529406	ARHGAP42-008	processed_transcript	Homo_sapiens	0	198
ENST00000529535	ARHGAP42-001	nonsense_mediated_decay	Homo_sapiens	0	1541
ENST00000531183	ARHGAP42-006	protein_coding	Homo_sapiens	0	693
ENST00000534060	ARHGAP42-007	processed_transcript	Homo_sapiens	0	202
ENST00000548856	ARHGAP42P5-001	processed_pseudogene	Homo_sapiens	0	797
ENST00000549782	ARHGAP42P4-001	processed_pseudogene	Homo_sapiens	0	869

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