C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094245 Cldn3-001 ENSMUSG00000070473 10090 + 5:134986214-134987472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094245
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094245 24.839±24.58 0.877±0.20 0.129±0.00 1.014±0.55 55.860±27.93 678.989±104.82 1.902±1.30 12.201±2.11 46.843±45.15 148.671±35.65 0.091±0.03 72.566±30.55 7.132±2.03 33.948±2.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005923 IDA tight junction
GO:0016021 NAS integral component of membrane
GO:0016328 IDA lateral plasma membrane
GO:0016338 IDA calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 IPI identical protein binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340958 CLDN4-201 protein_coding Homo_sapiens 0 344
ENST00000395145 CLDN3-001 protein_coding Homo_sapiens 0 780
ENST00000431918 CLDN4-001 protein_coding Homo_sapiens 0 344
ENST00000435050 CLDN4-002 protein_coding Homo_sapiens 0 344

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