C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: makorin, ring finger protein, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094340 Mkrn3-201 ENSMUSG00000070527 10090 - 7:62417593-62420139 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094340
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094340 0.752±0.24 0.922±0.34 1.520±0.27 5.432±4.29 0.712±0.27 0.429±0.13 0.191±0.07 0.420±0.09 0.284±0.12 0.898±0.18 0.140±0.04 1.861±0.88 0.507±0.28 0.946±0.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255977 MKRN1-001 protein_coding Homo_sapiens 0 329
ENST00000314520 MKRN3-001 protein_coding Homo_sapiens 0 1031
ENST00000443720 MKRN1-002 protein_coding Homo_sapiens 9.80909e-45 185
ENST00000444706 MKRN4P-001 processed_pseudogene Homo_sapiens 0 350
ENST00000445263 MKRN5P-001 processed_pseudogene Homo_sapiens 0 263
ENST00000445872 RP11-535M15.2-001 transcribed_processed_pseudogene Homo_sapiens 0 254
ENST00000468447 MKRN1-017 retained_intron Homo_sapiens 0 329
ENST00000474576 MKRN1-007 protein_coding Homo_sapiens 0 329
ENST00000475010 MKRN1-006 retained_intron Homo_sapiens 0 265
ENST00000480552 MKRN1-015 protein_coding Homo_sapiens 5.60519e-45 185
ENST00000495305 MKRN1-003 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000496169 MKRN1-005 nonsense_mediated_decay Homo_sapiens 9.80909e-45 185
ENST00000564592 MKRN3-003 protein_coding Homo_sapiens 0 213
ENST00000568945 MKRN3-004 processed_transcript Homo_sapiens 0 213
ENST00000570112 MKRN3-002 nonsense_mediated_decay Homo_sapiens 0 213

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