C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445872 RP11-535M15.2-001 ENSG00000233820 9606 + 9:96725890-96727243 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000445872
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000445872 0.043±0.00 0.052±0.00 0.032±0.00 0.799±0.50 0.150±0.01 0.174±0.16 0.093±0.00 0.521±0.00 0.135±0.12 0.105±0.05 0.017±0.00 0.030±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z5 CIL_0008Z5_0001 VISTA 9:96215463-96816013

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031985 Mkrn1-001 protein_coding Mus_musculus 0 1437
ENSMUST00000114823 Mkrn1-004 protein_coding Mus_musculus 0 1410
ENSMUST00000122035 Mkrn1-ps1-001 processed_pseudogene Mus_musculus 0 1293
ENSMUST00000051671 Mkrn1-005 protein_coding Mus_musculus 0 859
ENSMUST00000122996 Mkrn1-003 protein_coding Mus_musculus 0 833
ENSMUST00000121895 Gm15989-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000150575 Mkrn1-007 protein_coding Mus_musculus 0 440
ENSMUST00000122874 Mkrn1-008 processed_transcript Mus_musculus 0 420
ENSMUST00000114822 Mkrn1-002 protein_coding Mus_musculus 0 411
ENSMUST00000146785 Mkrn1-006 protein_coding Mus_musculus 0 394
ENSMUST00000094340 Mkrn3-201 protein_coding Mus_musculus 0 254

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