C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 193, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094867 Fam193a-201 ENSMUSG00000037210 10090 + 5:34426337-34485747 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000094867
Transcript ID Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000094867 5.449±0.57 5.103±0.00 4.268±0.71 1.156±0.22 4.028±1.19 1.838±0.33 0.560±0.00 5.398±1.89 3.076±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057G CIL_00057G_0002 CGP 5:34336289-34486456
CIL_0003OC CIL_0003OC_0003 CGP 5:34369933-34513997

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324666 FAM193A-001 protein_coding Homo_sapiens 0 3633
ENST00000382839 FAM193A-002 protein_coding Homo_sapiens 0 3858
ENST00000502458 FAM193A-005 protein_coding Homo_sapiens 0 3293
ENST00000505311 FAM193A-007 protein_coding Homo_sapiens 0 3731
ENST00000506120 FAM193A-010 retained_intron Homo_sapiens 0 536
ENST00000506904 FAM193A-009 retained_intron Homo_sapiens 0 394
ENST00000512465 FAM193A-003 nonsense_mediated_decay Homo_sapiens 0 2606
ENST00000513350 FAM193A-004 protein_coding Homo_sapiens 0 3055
ENST00000513898 FAM193A-006 nonsense_mediated_decay Homo_sapiens 0 3568
ENST00000545951 FAM193A-201 protein_coding Homo_sapiens 0 3731

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