C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein, axonemal assembly factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094897 Dnaaf3-001 ENSMUSG00000055809 10090 - 7:4522933-4532453 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094897
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094897 1.832±0.16 1.048±0.25 0.925±0.59 4.670±0.95 1.219±0.12 0.479±0.16 0.166±0.08 7.882±0.65 0.131±0.06 6.663±0.97 0.659±0.36 55.560±24.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065K CIL_00065K_0002 CGP 7:4504570-4524229
CIL_0004TD CIL_0004TD_0002 CGP 7:4518305-4532453
CIL_0003OX CIL_0003OX_0002 CGP 7:4522933-4546567

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0044458 ISS motile cilium assembly
GO:0070286 ISS axonemal dynein complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391720 DNAAF3-002 protein_coding Homo_sapiens 0 1026
ENST00000455045 DNAAF3-201 protein_coding Homo_sapiens 0 883
ENST00000524407 DNAAF3-003 protein_coding Homo_sapiens 0 1040
ENST00000526959 DNAAF3-010 retained_intron Homo_sapiens 0 499
ENST00000527166 DNAAF3-007 processed_transcript Homo_sapiens 0 363
ENST00000527223 DNAAF3-001 protein_coding Homo_sapiens 0 953
ENST00000527292 DNAAF3-008 processed_transcript Homo_sapiens 5e-33 145
ENST00000528412 DNAAF3-006 nonsense_mediated_decay Homo_sapiens 0 883
ENST00000533527 DNAAF3-005 retained_intron Homo_sapiens 0 651

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