C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 2, O region beta locus
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095342 H2-Ob-001 ENSMUSG00000041538 10090 + 17:34238903-34245907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095342
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095342 0.815±0.44 0.331±0.14 0.354±0.09 0.102±0.09 17.059±11.02 0.636±0.14 0.791±0.69 0.773±0.44 0.310±0.20 5.200±0.89 1.016±1.35 0.766±0.30 0.046±0.03 0.023±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PK CIL_0001PK_0006 CGP 17:34238903-34269418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002504 IEA antigen processing and presentation of peptide or polysaccharide antigen via MHC class II
GO:0002587 IEA negative regulation of antigen processing and presentation of peptide antigen via MHC class II
GO:0005622 IDA intracellular
GO:0005764 IEA lysosome
GO:0006955 IEA immune response
GO:0016021 IEA integral component of membrane
GO:0023026 IEA MHC class II protein complex binding

Homologs

No Homologs available.

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