C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095385 Ric8b-202 ENSMUSG00000035620 10090 + 10:84917656-85016446 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095385
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095385 4.603±1.68 1.013±0.00 6.765±0.60 12.072±3.82 7.466±4.08 2.537±0.00 6.476±1.22 3.118±0.62 1.898±1.01 3.724±1.41 4.694±0.74 4.639±1.77 3.597±0.72 0.813±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MF CIL_0001MF_0002 CGP 10:84756062-85016446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355478 RIC8B-002 protein_coding Homo_sapiens 0 1988
ENST00000392837 RIC8B-001 protein_coding Homo_sapiens 0 2331
ENST00000392839 RIC8B-006 protein_coding Homo_sapiens 0 2915
ENST00000462949 RIC8B-003 nonsense_mediated_decay Homo_sapiens 0 2259
ENST00000470628 RIC8B-005 retained_intron Homo_sapiens 0 2209
ENST00000470960 RIC8B-004 nonsense_mediated_decay Homo_sapiens 0 1083
ENST00000546449 RIC8B-010 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000548914 RIC8B-012 protein_coding Homo_sapiens 0 922
ENST00000549643 RIC8B-008 protein_coding Homo_sapiens 0 660
ENST00000550215 RIC8B-007 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000551756 RIC8B-011 retained_intron Homo_sapiens 0 484
ENST00000552619 RIC8B-009 protein_coding Homo_sapiens 0 370

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