C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: blood vessel epicardial substance
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095715 Bves-201 ENSMUSG00000071317 10090 + 10:45335762-45369708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095715 0.250±0.00 0.074±0.03 13.399±0.89 0.384±0.09 2.174±1.61 2.917±1.22 13.357±1.18 0.155±0.10 0.042±0.02 1.197±0.24 21.610±2.94 4.853±2.69 0.871±1.04 0.262±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082P CIL_00082P_0002 VISTA 10:44839829-45441705
CIL_00089G CIL_00089G_0002 VISTA 10:44928613-45531786
CIL_0004CC CIL_0004CC_0002 CGP 10:45178098-45369708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001921 IDA positive regulation of receptor recycling
GO:0002027 IMP regulation of heart rate
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0005198 ISS structural molecule activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005923 IDA tight junction
GO:0008360 IDA regulation of cell shape
GO:0016020 IDA membrane
GO:0016021 IDA integral component of membrane
GO:0016192 IDA vesicle-mediated transport
GO:0016328 IDA lateral plasma membrane
GO:0030552 IDA cAMP binding
GO:0032314 IDA regulation of Rac GTPase activity
GO:0034446 IDA substrate adhesion-dependent cell spreading
GO:0040017 IDA positive regulation of locomotion
GO:0042391 IGI regulation of membrane potential
GO:0043088 IDA regulation of Cdc42 GTPase activity
GO:0060931 IMP sinoatrial node cell development
GO:0090136 ISS epithelial cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314641 BVES-003 protein_coding Homo_sapiens 0 1092
ENST00000336775 BVES-001 protein_coding Homo_sapiens 0 1092
ENST00000446408 BVES-002 protein_coding Homo_sapiens 0 1094

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