C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: A kinase (PRKA) anchor protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095737 Akap6-201 ENSMUSG00000061603 10090 + 12:52699383-53151015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095737 0.306±0.05 0.272±0.04 2.961±0.79 16.061±5.89 0.220±0.17 0.716±0.18 9.635±1.14 0.144±0.04 0.026±0.02 0.732±0.19 3.567±2.21 0.510±0.15 0.043±0.01 0.278±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H7 CIL_0000H7_0002 CGP 12:52516077-53151015
CIL_0007W5 CIL_0007W5_0002 VISTA 12:52533658-53137423
CIL_0005RB CIL_0005RB_0003 CGP 12:52699383-54072175

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005635 IEA nuclear envelope
GO:0016529 IEA sarcoplasmic reticulum
GO:0034704 IEA calcium channel complex
GO:0044325 IEA ion channel binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0060306 IEA regulation of membrane repolarization
GO:0071320 IEA cellular response to cAMP
GO:1901381 IEA positive regulation of potassium ion transmembrane transport
GO:1902261 IEA positive regulation of delayed rectifier potassium channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280979 AKAP6-001 protein_coding Homo_sapiens 0 7317
ENST00000553547 AKAP6-003 protein_coding Homo_sapiens 0 1074
ENST00000554410 AKAP6-008 protein_coding Homo_sapiens 0 540
ENST00000554449 AKAP6-006 processed_transcript Homo_sapiens 0 420
ENST00000554740 AKAP6-015 protein_coding Homo_sapiens 0 307
ENST00000555207 AKAP6-010 processed_transcript Homo_sapiens 0 1035
ENST00000555950 AKAP6-011 processed_transcript Homo_sapiens 0 608
ENST00000556037 AKAP6-007 retained_intron Homo_sapiens 0 507
ENST00000556540 AKAP6-014 processed_transcript Homo_sapiens 0 497
ENST00000556638 AKAP6-009 protein_coding Homo_sapiens 0 562
ENST00000557102 AKAP6-005 protein_coding Homo_sapiens 0 424
ENST00000557272 AKAP6-004 protein_coding Homo_sapiens 0 3714
ENST00000557354 AKAP6-002 protein_coding Homo_sapiens 0 3206
ENST00000557396 AKAP6-013 processed_transcript Homo_sapiens 0 414
ENST00000557708 AKAP6-012 processed_transcript Homo_sapiens 0 536

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