C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007W5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1647 VISTA 9606 14:32170844-32774888
GeneTranscriptPositionBiotype
ENSG00000151320 (AKAP6)
A kinase (PRKA) anchor protein 6 		ENST00000280979 (AKAP6-001) 32329273-32837681 protein_coding
ENST00000553547 (AKAP6-003) 32473757-32546449 protein_coding
ENST00000554410 (AKAP6-008) 32494271-32545455 protein_coding
ENST00000554449 (AKAP6-006) 32433164-32439032 processed_transcript
ENST00000554740 (AKAP6-015) 32735851-32774001 protein_coding
ENST00000555207 (AKAP6-010) 32616967-32773791 processed_transcript
ENST00000555950 (AKAP6-011) 32616978-32732765 processed_transcript
ENST00000556037 (AKAP6-007) 32329350-32433982 retained_intron
ENST00000556540 (AKAP6-014) 32733262-32773829 processed_transcript
ENST00000556638 (AKAP6-009) 32495072-32545520 protein_coding
ENST00000557102 (AKAP6-005) 32329349-32433817 protein_coding
ENST00000557272 (AKAP6-004) 32329400-32830817 protein_coding
ENST00000557354 (AKAP6-002) 32329344-32734613 protein_coding
ENST00000557396 (AKAP6-013) 32693401-32732584 processed_transcript
ENST00000557708 (AKAP6-012) 32693462-32735725 processed_transcript
ENSG00000258580 (RP11-320M16.2)
 ENST00000556520 (RP11-320M16.2-002) 32403044-32417974 antisense
ENST00000557371 (RP11-320M16.2-001) 32373337-32417963 antisense
ENSG00000258619 (RP11-134E15.1)
 ENST00000556497 (RP11-134E15.1-001) 32241524-32243093 processed_pseudogene
ENSG00000259045 (RP11-320M16.1)
 ENST00000554243 (RP11-320M16.1-001) 32484098-32484800 unprocessed_pseudogene
ENSG00000259086 (RP11-134E15.2)
 ENST00000556746 (RP11-134E15.2-001) 32271857-32272301 processed_pseudogene
ENSG00000277394 (AL132988.1)
 ENST00000622426 (AL132988.1-201) 32484915-32484991 miRNA
ENSG00000278746 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000614852 (Metazoa_SRP.1-490) 32442341-32442639 misc_RNA
CIL_0007W5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1647 VISTA 10090 12:52533658-53137423
GeneTranscriptPositionBiotype
ENSMUSG00000035133 (Arhgap5)
Rho GTPase activating protein 5 		ENSMUST00000110725 (Arhgap5-201) 52516077-52567852 protein_coding
ENSMUSG00000061603 (Akap6)
A kinase (PRKA) anchor protein 6 		ENSMUST00000095737 (Akap6-201) 52699383-53151015 protein_coding
ENSMUSG00000064489 (Gm23296)
predicted gene, 23296 		ENSMUST00000082555 (Gm23296-201) 52604485-52604591 snRNA
ENSMUSG00000064663 (Gm24859)
predicted gene, 24859 		ENSMUST00000082729 (Gm24859-201) 52603788-52603894 snRNA
ENSMUSG00000100315 (RP23-402F16.1)
RIKEN cDNA 1700031P21 gene 		ENSMUST00000186498 (RP23-402F16.1-002) 52601613-52602319 lincRNA
ENSMUST00000187526 (RP23-402F16.1-001) 52599981-52602322 lincRNA
ENSMUST00000191400 (RP23-402F16.1-003) 52601595-52602318 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007W5_0001ENSG00000151320ENST00000280979ENST00000553547ENST00000554410ENST00000554449ENST00000554740ENST00000555207ENST00000555950ENST00000556037ENST00000556540ENST00000556638ENST00000557102ENST00000557272ENST00000557354ENST00000557396ENST00000557708ENSG00000258580ENST00000556520ENST00000557371ENSG00000258619ENST00000556497ENSG00000259045ENST00000554243ENSG00000259086ENST00000556746ENSG00000277394ENST00000622426ENSG00000278746ENST00000614852CIL_0007W5_0002ENSMUSG00000035133ENSMUST00000110725ENSMUSG00000061603ENSMUST00000095737ENSMUSG00000064489ENSMUST00000082555ENSMUSG00000064663ENSMUST00000082729ENSMUSG00000100315ENSMUST00000186498ENSMUST00000187526ENSMUST00000191400
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007W5_0001ENSG00000151320ENST00000280979ENST00000557272ENST00000557354ENSG00000258580ENST00000556520ENST00000557371ENSG00000258619ENST00000556497ENSG00000259045ENST00000554243ENSG00000259086ENST00000556746ENSG00000277394ENST00000622426ENSG00000278746ENST00000614852CIL_0007W5_0002ENSMUSG00000035133ENSMUST00000110725ENSMUSG00000061603ENSMUST00000095737ENSMUSG00000064489ENSMUST00000082555ENSMUSG00000064663ENSMUST00000082729ENSMUSG00000100315ENSMUST00000186498ENSMUST00000187526ENSMUST00000191400
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151320 ENST00000280979 N/A N/A N/A 2.493±0.98 N/A N/A 1.798±0.33 N/A N/A N/A N/A 0.058±0.00 N/A 0.334±0.00
ENST00000553547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557272 0.198±0.00 0.594±0.00 1.106±0.00 12.469±0.03 0.836±0.15 1.441±0.01 8.659±0.00 0.455±0.17 2.707±2.66 0.930±0.31 11.683±0.65 0.255±0.15 0.313±0.21 1.747±0.00
ENST00000557354 N/A N/A N/A N/A N/A N/A N/A N/A 1.679±0.00 0.697±0.25 N/A 0.138±0.00 0.147±0.08 N/A
ENST00000557396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258580 ENST00000556520 N/A N/A N/A N/A N/A N/A 0.079±0.00 0.059±0.00 N/A N/A N/A N/A N/A 0.052±0.00
ENST00000557371 N/A N/A N/A 0.080±0.00 N/A N/A 0.174±0.00 0.053±0.00 0.102±0.00 N/A N/A N/A N/A 0.018±0.00
ENSG00000258619 ENST00000556497 N/A N/A 0.353±0.00 0.033±0.00 0.221±0.00 N/A 0.196±0.18 0.069±0.00 N/A N/A N/A 0.062±0.00 N/A 0.101±0.07
ENSG00000259045 ENST00000554243 2.182±0.00 1.073±0.00 N/A 2.588±0.00 2.489±0.00 0.707±0.00 4.580±0.00 4.324±0.00 1.778±0.00 0.594±0.00 3.081±0.00 4.533±0.00 N/A 0.424±0.29
ENSG00000259086 ENST00000556746 N/A 0.032±0.00 N/A 0.060±0.00 0.226±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00
ENSG00000277394 ENST00000622426 17.050±0.00 15.634±0.00 N/A 44.787±0.00 67.710±0.00 5.726±0.00 1087.600±0.00 268.107±0.00 185.397±0.00 214.190±0.00 187.317±0.00 3.089±0.00 N/A 3.493±0.00
ENSG00000278746 ENST00000614852 0.354±0.00 0.571±0.00 N/A 1.103±0.00 0.336±0.00 0.621±0.50 N/A 0.193±0.00 0.221±0.11 0.158±0.00 1.684±1.63 N/A N/A 0.173±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035133 ENSMUST00000110725 0.925±0.23 1.446±0.34 4.760±0.00 5.764±0.59 1.818±0.85 2.982±0.03 1.535±0.60 1.421±0.00 1.664±1.19 2.139±0.00 1.508±0.80 3.688±2.49 4.881±2.65 3.789±2.86
ENSMUSG00000061603 ENSMUST00000095737 0.306±0.05 0.272±0.04 2.961±0.79 16.061±5.89 0.220±0.17 0.716±0.18 9.635±1.14 0.144±0.04 0.026±0.02 0.732±0.19 3.567±2.21 0.510±0.15 0.043±0.01 0.278±0.00
ENSMUSG00000064489 ENSMUST00000082555 N/A N/A 21.253±0.00 7.306±0.00 N/A N/A N/A N/A 18.620±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000064663 ENSMUST00000082729 N/A N/A 21.253±0.00 7.306±0.00 N/A N/A N/A N/A 18.620±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000100315 ENSMUST00000186498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.946±0.00
ENSMUST00000187526 N/A N/A N/A N/A N/A N/A 0.244±0.00 N/A N/A N/A N/A N/A N/A 58.498±25.44
ENSMUST00000191400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.282±13.58

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