C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spindlin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095797 Spin1-201 ENSMUSG00000021395 10090 + 13:51100880-51152546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095797
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095797 20.293±8.16 9.798±2.85 15.421±4.57 30.366±13.09 11.678±2.30 10.182±1.66 7.109±0.93 16.373±1.56 10.772±4.81 17.963±1.45 3.187±0.55 26.409±11.62 15.633±6.05 4.372±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000078 CIL_000078_0003 CGP 13:51100880-51175187

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 ISS nucleolus
GO:0005737 IEA cytoplasm
GO:0005819 IDA spindle
GO:0007143 IC female meiotic division
GO:0007275 IEA multicellular organismal development
GO:0007276 IEA gamete generation
GO:0009303 ISS rRNA transcription
GO:0016055 IEA Wnt signaling pathway
GO:0016568 IEA chromatin modification
GO:0030177 ISS positive regulation of Wnt signaling pathway
GO:0035064 ISS methylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375859 SPIN1-001 protein_coding Homo_sapiens 0 1568
ENST00000462844 SPIN1-005 processed_transcript Homo_sapiens 0 448
ENST00000469017 SPIN1-004 processed_transcript Homo_sapiens 0 1500
ENST00000483785 SPIN1-002 processed_transcript Homo_sapiens 0 756
ENST00000485565 SPIN1-006 processed_transcript Homo_sapiens 0 518
ENST00000485804 SPIN1-003 processed_transcript Homo_sapiens 0 1022

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