C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spindlin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375859 SPIN1-001 ENSG00000106723 9606 + 9:88388419-88478694 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000375859
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000375859 12.022±0.00 3.047±0.00 21.291±1.57 3.652±0.00 10.509±5.38 1.647±0.63 0.514±0.00 2.189±0.57 6.970±0.00 16.483±10.87 13.702±7.47 21.144±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000078 CIL_000078_0002 CGP 9:88388419-88584274

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005819 IEA spindle
GO:0007275 IEA multicellular organismal development
GO:0007276 IEA gamete generation
GO:0009303 IDA rRNA transcription
GO:0016055 IEA Wnt signaling pathway
GO:0016568 IEA chromatin modification
GO:0030177 IDA positive regulation of Wnt signaling pathway
GO:0035064 IDA methylated histone binding
GO:0051321 IEA meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095797 Spin1-201 protein_coding Mus_musculus 0 1568

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