C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000078_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058949-ENSDARG00000003934 CGP 7955 10:2595456-2612287
GeneTranscriptPositionBiotype
ENSDARG00000003934 (nxnl2)
nucleoredoxin-like 2 		ENSDART00000016103 (nxnl2-201) 2608904-2612287 protein_coding
ENSDARG00000058949 (SPIN1)
 ENSDART00000081922 (SPIN1-201) 2595456-2607514 protein_coding
CIL_000078_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106723-ENSG00000130045 CGP 9606 9:88388419-88584274
GeneTranscriptPositionBiotype
ENSG00000106723 (SPIN1)
spindlin 1 		ENST00000375859 (SPIN1-001) 88388419-88478694 protein_coding
ENST00000462844 (SPIN1-005) 88388444-88462638 processed_transcript
ENST00000469017 (SPIN1-004) 88388431-88475914 processed_transcript
ENST00000483785 (SPIN1-002) 88389371-88468477 processed_transcript
ENST00000485565 (SPIN1-006) 88388452-88475203 processed_transcript
ENST00000485804 (SPIN1-003) 88388430-88475245 processed_transcript
ENSG00000130045 (NXNL2)
nucleoredoxin-like 2 		ENST00000375854 (NXNL2-201) 88535101-88544547 protein_coding
ENST00000375855 (NXNL2-003) 88535105-88575789 protein_coding
ENST00000478686 (NXNL2-002) 88535186-88584274 processed_transcript
ENST00000487646 (NXNL2-001) 88535105-88544980 processed_transcript
ENST00000618633 (NXNL2-202) 88535101-88539811 protein_coding
ENSG00000227638 (HNRNPA1P14)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 14 		ENST00000440352 (HNRNPA1P14-001) 88410529-88411463 processed_pseudogene
ENSG00000231804 (RP11-317B17.3)
 ENST00000440753 (RP11-317B17.3-001) 88484852-88485325 processed_pseudogene
ENSG00000275017 (RP11-317B17.4)
 ENST00000622148 (RP11-317B17.4-001) 88391362-88391832 processed_pseudogene
CIL_000078_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021395-ENSMUSG00000021396 CGP 10090 13:51100880-51175187
GeneTranscriptPositionBiotype
ENSMUSG00000021395 (Spin1)
spindlin 1 		ENSMUST00000095797 (Spin1-201) 51100880-51152546 protein_coding
ENSMUSG00000021396 (Nxnl2)
nucleoredoxin-like 2 		ENSMUST00000021828 (Nxnl2-201) 51171025-51175187 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000078_0001ENSDARG00000003934ENSDART00000016103ENSDARG00000058949ENSDART00000081922CIL_000078_0002ENSG00000106723ENST00000375859ENST00000462844ENST00000469017ENST00000483785ENST00000485565ENST00000485804ENSG00000130045ENST00000375854ENST00000375855ENST00000478686ENST00000487646ENST00000618633ENSG00000227638ENST00000440352ENSG00000231804ENST00000440753ENSG00000275017ENST00000622148CIL_000078_0003ENSMUSG00000021395ENSMUST00000095797ENSMUSG00000021396ENSMUST00000021828
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000078_0001ENSDARG00000003934ENSDART00000016103ENSDARG00000058949ENSDART00000081922CIL_000078_0002ENSG00000106723ENST00000375859ENST00000469017ENST00000483785ENST00000485804ENSG00000130045ENST00000375854ENST00000375855ENST00000487646ENST00000618633ENSG00000227638ENST00000440352ENSG00000231804ENST00000440753ENSG00000275017ENST00000622148CIL_000078_0003ENSMUSG00000021395ENSMUST00000095797ENSMUSG00000021396ENSMUST00000021828
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003934 ENSDART00000016103 N/A N/A N/A 0.383±0.16 N/A N/A 4.781±1.21 2.079±1.03 0.152±0.00 N/A 0.450±0.00 N/A N/A N/A
ENSDARG00000058949 ENSDART00000081922 N/A N/A N/A 23.685±4.53 N/A N/A 6.123±2.06 5.115±1.36 0.380±0.00 N/A 2.187±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106723 ENST00000375859 12.022±0.00 N/A 3.047±0.00 21.291±1.57 3.652±0.00 10.509±5.38 1.647±0.63 0.514±0.00 2.189±0.57 6.970±0.00 N/A 16.483±10.87 13.702±7.47 21.144±1.42
ENST00000462844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469017 N/A N/A N/A N/A N/A N/A N/A 1.383±0.00 N/A N/A N/A N/A N/A N/A
ENST00000483785 N/A N/A 8.203±0.00 N/A N/A N/A N/A N/A N/A N/A 1.381±0.00 N/A N/A N/A
ENST00000485565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.426±0.00
ENSG00000130045 ENST00000375854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.635±0.00 N/A N/A
ENST00000375855 0.400±0.00 0.921±0.00 0.827±0.00 0.361±0.27 0.671±0.00 0.357±0.00 0.345±0.00 0.557±0.00 0.867±0.00 0.486±0.00 0.215±0.00 0.452±0.41 0.090±0.04 0.194±0.09
ENST00000478686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487646 N/A N/A N/A 0.172±0.01 0.220±0.00 0.395±0.00 N/A 0.503±0.00 N/A 0.154±0.00 N/A 1.013±0.91 0.325±0.12 1.045±0.22
ENST00000618633 N/A N/A 1.372±0.00 N/A N/A N/A N/A 0.703±0.00 N/A N/A N/A N/A N/A 1.070±0.00
ENSG00000227638 ENST00000440352 0.292±0.00 0.277±0.00 0.286±0.00 0.148±0.00 0.325±0.11 0.121±0.00 0.133±0.00 0.322±0.00 N/A 0.042±0.00 0.026±0.00 0.187±0.10 0.082±0.00 0.062±0.04
ENSG00000231804 ENST00000440753 N/A N/A 0.154±0.00 0.025±0.00 0.096±0.00 0.068±0.00 0.074±0.00 N/A 0.022±0.00 N/A 0.023±0.00 0.183±0.12 N/A N/A
ENSG00000275017 ENST00000622148 0.084±0.00 N/A 3.068±0.00 N/A 0.118±0.00 N/A 0.080±0.00 N/A N/A 0.696±0.32 N/A 0.211±0.00 0.226±0.00 0.341±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021395 ENSMUST00000095797 20.293±8.16 9.798±2.85 15.421±4.57 30.366±13.09 11.678±2.30 10.182±1.66 7.109±0.93 16.373±1.56 10.772±4.81 17.963±1.45 3.187±0.55 26.409±11.62 15.633±6.05 4.372±2.06
ENSMUSG00000021396 ENSMUST00000021828 0.827±0.51 0.210±0.11 1.055±0.71 0.330±0.05 0.597±0.28 0.450±0.19 0.173±0.09 0.210±0.10 0.103±0.05 0.413±0.08 0.064±0.01 3.308±1.27 1.022±0.50 2.664±0.76

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