C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TATA box binding protein (Tbp)-associated factor, RNA polymerase I, A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097043 Taf1a-201 ENSMUSG00000072258 10090 + 1:183388981-183409353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000097043
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000097043 1.708±0.00 0.700±0.17 5.032±0.37 3.500±1.09 0.843±0.29 0.716±0.00 0.777±0.00 1.554±1.05 1.466±1.21 4.729±3.70 3.413±1.65 2.637±1.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TE CIL_0002TE_0002 CGP 1:183326725-183409353

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000120 TAS RNA polymerase I transcription factor complex
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006360 TAS transcription from RNA polymerase I promoter
GO:0015630 IEA microtubule cytoskeleton
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350027 TAF1A-201 protein_coding Homo_sapiens 0 1042
ENST00000352967 TAF1A-001 protein_coding Homo_sapiens 0 1042
ENST00000366890 TAF1A-002 protein_coding Homo_sapiens 0 833
ENST00000465263 TAF1A-003 processed_transcript Homo_sapiens 0 619
ENST00000487009 TAF1A-004 processed_transcript Homo_sapiens 0 472

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