C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000352967 TAF1A-001 ENSG00000143498 9606 - 1:222558308-222589913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000352967
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000352967 0.148±0.00 0.512±0.00 0.663±0.00 0.801±0.00 0.596±0.41 0.531±0.00 0.118±0.00 0.267±0.00 0.929±0.00 1.166±0.76 1.043±0.28 0.972±0.00 1.152±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000120 IEA RNA polymerase I transcription factor complex
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006360 TAS:IEA transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0015630 IDA microtubule cytoskeleton
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097043 Taf1a-201 protein_coding Mus_musculus 0 1042

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