C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000350027 TAF1A-201 ENSG00000143498 9606 - 1:222557902-222589933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyMuscleOvaryTestisENST00000350027
Transcript ID Brain Colon Heart Kidney Muscle Ovary Testis
ENST00000350027 0.551±0.00 0.980±0.00 0.201±0.00 0.550±0.00 0.114±0.00 1.006±0.07 1.678±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000120 IEA RNA polymerase I transcription factor complex
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006360 TAS:IEA transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0015630 IDA microtubule cytoskeleton
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097043 Taf1a-201 protein_coding Mus_musculus 0 1042

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