C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 179, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097284 Fam179a-201 ENSMUSG00000045761 10090 + 17:71673261-71729669 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungOvaryENSMUST00000097284
Transcript ID Breast Colon Lung Ovary
ENSMUST00000097284 0.049±0.00 0.045±0.00 2.968±1.04 1.811±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013N CIL_00013N_0002 CGP 17:71616215-71729669
CIL_00013O CIL_00013O_0002 CGP 17:71673261-71752885

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379558 FAM179A-003 protein_coding Homo_sapiens 0 1589
ENST00000401723 FAM179A-007 protein_coding Homo_sapiens 0 555
ENST00000460951 FAM179A-006 retained_intron Homo_sapiens 0 217
ENST00000465300 FAM179A-001 processed_transcript Homo_sapiens 0 845
ENST00000475900 FAM179A-002 retained_intron Homo_sapiens 0 425

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