C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and coiled-coil domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097473 Tmco1-201 ENSMUSG00000052428 10090 + 1:167308670-167333978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097473 12.491±1.22 48.327±4.07 7.217±4.97 9.214±4.26 11.468±1.55 9.947±0.92 6.138±2.47 16.866±2.97 14.033±3.85 12.791±1.36 3.085±1.54 11.307±3.14 13.635±2.66 2.516±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367881 TMCO1-001 protein_coding Homo_sapiens 0 787
ENST00000392129 TMCO1-008 protein_coding Homo_sapiens 0 787
ENST00000464650 TMCO1-005 protein_coding Homo_sapiens 0 689
ENST00000465705 TMCO1-002 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000476143 TMCO1-007 nonsense_mediated_decay Homo_sapiens 0 381
ENST00000481278 TMCO1-003 protein_coding Homo_sapiens 0 545
ENST00000580248 TMCO1-006 protein_coding Homo_sapiens 0 688
ENST00000612311 TMCO1-201 protein_coding Homo_sapiens 0 787

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