C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and coiled-coil domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392129 TMCO1-008 ENSG00000143183 9606 - 1:165726795-165768902 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392129
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392129 6.502±0.00 7.968±0.00 3.502±0.00 7.393±2.99 7.215±0.13 8.582±3.80 3.685±0.22 15.187±3.26 10.410±1.71 6.905±1.57 2.557±0.36 21.105±10.59 17.545±5.36 12.051±3.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027Y CIL_00027Y_0002 CGP 1:165662216-165827755
CIL_00027V CIL_00027V_0002 CGP 1:165724293-165911618

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097473 Tmco1-201 protein_coding Mus_musculus 0 787

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