C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097590 Lars-201 ENSMUSG00000024493 10090 - 18:42202350-42262122 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097590
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097590 3.234±2.22 2.510±0.65 7.642±3.35 7.905±4.07 2.056±0.96 2.008±1.07 3.964±0.37 2.599±0.93 5.491±4.61 4.005±1.46 9.172±0.52 5.806±5.94 20.016±9.92 3.625±2.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GF CIL_0001GF_0003 CGP 18:42178675-42262122
CIL_0001J0 CIL_0001J0_0003 CGP 18:42202350-42341542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002161 IEA aminoacyl-tRNA editing activity
GO:0004823 IEA leucine-tRNA ligase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006429 IEA leucyl-tRNA aminoacylation
GO:0006450 IEA regulation of translational fidelity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274562 LARS-201 protein_coding Homo_sapiens 0 1592
ENST00000394434 LARS-001 protein_coding Homo_sapiens 0 3840
ENST00000503654 LARS-011 processed_transcript Homo_sapiens 0 342
ENST00000504323 LARS-005 retained_intron Homo_sapiens 0 462
ENST00000504611 LARS-014 retained_intron Homo_sapiens 0 204
ENST00000505223 LARS-012 processed_transcript Homo_sapiens 0 239
ENST00000506231 LARS-003 retained_intron Homo_sapiens 0 985
ENST00000506436 LARS-010 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000507095 LARS-006 processed_transcript Homo_sapiens 0 252
ENST00000508667 LARS-004 retained_intron Homo_sapiens 0 625
ENST00000508709 LARS-015 retained_intron Homo_sapiens 0 388
ENST00000510191 LARS-002 protein_coding Homo_sapiens 0 3733
ENST00000511505 LARS-013 processed_transcript Homo_sapiens 0 756
ENST00000514104 LARS-007 retained_intron Homo_sapiens 0 442
ENST00000618084 LARS-202 protein_coding Homo_sapiens 0 636

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