C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097593 Arhgap26-001 ENSMUSG00000036452 10090 + 18:38993145-39376284 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097593 1.178±0.44 2.307±0.01 0.923±0.37 0.486±0.28 1.653±0.74 1.337±0.21 3.099±0.56 0.903±0.38 0.349±0.21 1.872±0.47 0.237±0.17 1.106±0.65 0.653±0.44 0.775±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W6 CIL_0007W6_0002 VISTA 18:38503792-39105763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005543 IEA phospholipid binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction
GO:0008093 IEA cytoskeletal adaptor activity
GO:0017124 IEA SH3 domain binding
GO:0030054 IEA cell junction
GO:0043547 IEA positive regulation of GTPase activity
GO:0046847 IEA filopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274498 ARHGAP26-001 protein_coding Homo_sapiens 0 3579
ENST00000378004 ARHGAP26-008 protein_coding Homo_sapiens 0 2789
ENST00000378013 ARHGAP26-014 protein_coding Homo_sapiens 0 595
ENST00000418236 ARHGAP26-020 protein_coding Homo_sapiens 0 835
ENST00000419676 ARHGAP26-019 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000421521 ARHGAP26-012 protein_coding Homo_sapiens 0 566
ENST00000424007 ARHGAP26-018 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000425417 ARHGAP26-013 protein_coding Homo_sapiens 5.60519e-45 185
ENST00000443674 ARHGAP26-021 protein_coding Homo_sapiens 0 1197
ENST00000451259 ARHGAP26-015 protein_coding Homo_sapiens 0 468
ENST00000461314 ARHGAP26-016 processed_transcript Homo_sapiens 0 268
ENST00000469131 ARHGAP26-004 retained_intron Homo_sapiens 0 734
ENST00000469396 ARHGAP26-005 processed_transcript Homo_sapiens 0 462
ENST00000475287 ARHGAP26-003 retained_intron Homo_sapiens 0 580
ENST00000477867 ARHGAP26-017 processed_transcript Homo_sapiens 0 416
ENST00000486650 ARHGAP26-011 processed_transcript Homo_sapiens 0 510
ENST00000489924 ARHGAP26-010 retained_intron Homo_sapiens 0 287

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