C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 26
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036452 Arhgap26 10090 + 18:38601534-39376284 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097593 Arhgap26-001 38993145-39376284 protein_coding
  ENSMUST00000115574 Arhgap26-006 38993145-39100149 retained_intron
  ENSMUST00000115580 Arhgap26-014 38892458-38971272 processed_transcript
  ENSMUST00000123820 Arhgap26-007 39099311-39126933 processed_transcript
  ENSMUST00000127448 Arhgap26-011 38601603-38789045 processed_transcript
  ENSMUST00000133247 Arhgap26-005 39362583-39367056 processed_transcript
  ENSMUST00000134388 Arhgap26-013 38676718-38775996 processed_transcript
  ENSMUST00000137497 Arhgap26-003 39286642-39376284 protein_coding
  ENSMUST00000141058 Arhgap26-008 39296785-39360930 protein_coding
  ENSMUST00000145090 Arhgap26-010 38601534-38645922 processed_transcript
  ENSMUST00000148399 Arhgap26-004 39291435-39307373 processed_transcript
  ENSMUST00000148850 Arhgap26-009 38676718-39110534 protein_coding
  ENSMUST00000149112 Arhgap26-012 38627287-38642930 processed_transcript
  ENSMUST00000151757 Arhgap26-016 39296785-39371129 nonsense_mediated_decay
  ENSMUST00000154551 Arhgap26-002 39227368-39372511 protein_coding
  ENSMUST00000155576 Arhgap26-017 38993476-39371162 protein_coding
  ENSMUST00000156167 Arhgap26-015 38955709-38970935 processed_transcript
  ENSMUST00000187912 Arhgap26-201 38892717-38933964 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097593ENSMUST00000115574ENSMUST00000133247ENSMUST00000137497ENSMUST00000141058ENSMUST00000148399ENSMUST00000154551ENSMUST00000155576
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097593 1.178±0.44 2.307±0.01 0.923±0.37 0.486±0.28 1.653±0.74 1.337±0.21 3.099±0.56 0.903±0.38 0.349±0.21 1.872±0.47 0.237±0.17 1.106±0.65 0.653±0.44 0.775±0.17
ENSMUST00000115574 N/A 35.719±6.76 N/A N/A 11.154±2.20 6.442±1.32 N/A N/A N/A 5.538±0.00 N/A 6.170±2.28 N/A N/A
ENSMUST00000133247 N/A N/A N/A N/A N/A N/A N/A N/A 4.341±0.00 N/A N/A N/A N/A N/A
ENSMUST00000137497 0.760±0.00 6.737±1.60 1.609±0.00 2.476±1.49 2.269±0.95 N/A 2.826±0.12 0.828±0.42 0.359±0.34 2.228±0.00 0.313±0.10 1.845±0.61 0.752±0.28 N/A
ENSMUST00000141058 3.142±0.11 N/A N/A N/A 6.170±0.65 N/A N/A 4.581±1.03 N/A N/A N/A 6.049±0.91 N/A 7.306±1.18
ENSMUST00000148399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.339±0.87
ENSMUST00000154551 N/A N/A N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A 0.491±0.00 N/A
ENSMUST00000155576 N/A 5.648±0.00 1.166±0.00 N/A 2.610±0.00 N/A N/A N/A 0.299±0.03 N/A N/A 2.476±0.46 1.349±0.91 1.873±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W6 CIL_0007W6_0002 VISTA 18:38503792-39105763

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005543 IEA phospholipid binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction
GO:0008093 IEA cytoskeletal adaptor activity
GO:0017124 IEA SH3 domain binding
GO:0030054 IEA cell junction
GO:0043547 IEA positive regulation of GTPase activity
GO:0046847 IEA filopodium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000145819 ARHGAP26 Rho GTPase activating protein 26 protein_coding Homo_sapiens

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