C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polynucleotide kinase 3'- phosphatase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098478 Pnkp-004 ENSMUSG00000002963 10090 + 7:44857344-44862649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098478
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098478 4.526±1.48 21.746±0.98 7.588±3.00 4.650±0.82 1.083±0.00 3.425±0.83 4.409±1.17 4.721±1.43 2.337±0.23 6.062±2.31 1.503±0.10 2.812±0.54

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322344 PNKP-001 protein_coding Homo_sapiens 0 593
ENST00000593706 PNKP-011 retained_intron Homo_sapiens 0 305
ENST00000593946 PNKP-005 nonsense_mediated_decay Homo_sapiens 0 593
ENST00000594661 PNKP-006 retained_intron Homo_sapiens 0 593
ENST00000596014 PNKP-004 protein_coding Homo_sapiens 0 593
ENST00000600573 PNKP-002 protein_coding Homo_sapiens 3e-35 154
ENST00000600910 PNKP-003 protein_coding Homo_sapiens 0 361

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