C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polynucleotide kinase 3'-phosphatase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600910 PNKP-003 ENSG00000039650 9606 - 19:49861239-49867555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonLiverLungOvaryPlacentaTestisENST00000600910
Transcript ID Adipose Bladder Colon Liver Lung Ovary Placenta Testis
ENST00000600910 2.372±0.00 0.717±0.00 1.420±0.00 1.131±0.00 3.204±1.78 3.175±2.94 7.622±0.00 10.829±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003044 Pnkp-001 protein_coding Mus_musculus 0 928
ENSMUST00000107876 Pnkp-002 protein_coding Mus_musculus 0 928
ENSMUST00000123015 Pnkp-005 processed_transcript Mus_musculus 0 512
ENSMUST00000098478 Pnkp-004 protein_coding Mus_musculus 0 361
ENSMUST00000145850 Pnkp-003 retained_intron Mus_musculus 0 361

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