C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family F (with FYVE domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098513 Plekhf1-201 ENSMUSG00000074170 10090 - 7:38220654-38227994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098513
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098513 4.529±0.96 3.506±0.54 16.481±8.27 0.427±0.15 10.349±3.25 7.534±1.03 8.765±4.02 8.848±1.13 2.754±1.74 6.309±1.59 4.387±1.63 25.825±10.17 4.322±1.70 3.375±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000835 CIL_000835_0002 VISTA 7:37670403-38271286
CIL_0008TZ CIL_0008TZ_0002 VISTA 7:37750392-38351469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005739 ISA mitochondrion
GO:0005764 IDA lysosome
GO:0005768 IEA endosome
GO:0006915 IEA apoptotic process
GO:0007032 IEA endosome organization
GO:0010314 IEA phosphatidylinositol-5-phosphate binding
GO:0010508 IEA positive regulation of autophagy
GO:0016050 IEA vesicle organization
GO:0032266 IEA phosphatidylinositol-3-phosphate binding
GO:0046872 IEA metal ion binding
GO:0046902 ISA regulation of mitochondrial membrane permeability
GO:0070273 IEA phosphatidylinositol-4-phosphate binding
GO:0072659 IEA protein localization to plasma membrane
GO:2001244 IDA positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000436066 PLEKHF1-001 protein_coding Homo_sapiens 0 830
ENST00000592810 PLEKHF1-002 protein_coding Homo_sapiens 0 830

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